Difference between revisions of "Introductory reading"

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== Literature for Mathematicians ==
 
== Literature for Mathematicians ==
  
A well-known theoretical introduction to the field. Carlsson: ''Topology and Data''. <ref>CARLSSON, Gunnar. Topology and data. ''Bulletin of the American Mathematical Society'', 2009, 46. Jg., Nr. 2, S. 255-308. [https://doi.org/10.1090/S0273-0979-09-01249-X doi:10.1090/S0273-0979-09-01249-X]</ref>
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A well-known theoretical introduction to the field. Carlsson: ''Topology and Data''.  
  
One of the papers introducing the notion of persistent homology of a filtration. Zomorodian and Carlsson: ''Computing persistent homology''.<ref>ZOMORODIAN, Afra; CARLSSON, Gunnar. Computing persistent homology. ''Discrete & Computational Geometry'', 2005, 33. Jg., Nr. 2, S. 249-274. [https://doi.org/10.1007/s00454-004-1146-y doi:10.1007/s00454-004-1146-y]</ref>
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One of the papers introducing the notion of persistent homology of a filtration. Zomorodian and Carlsson: ''Computing persistent homology''.
  
A recently introduced topological summary better suited than persistence diagrams to statistically analyze persistent homology, the persistence landscape. Bubenik: ''Statistical topological data analysis using persistence landscapes.''<ref>BUBENIK, Peter. Statistical topological data analysis using persistence landscapes. ''The Journal of Machine Learning Research'', 2015, 16. Jg., Nr. 1, S. 77-102. http://jmlr.org/papers/v16/bubenik15a.html</ref>
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A recently introduced topological summary better suited than persistence diagrams to statistically analyze persistent homology, the persistence landscape. Bubenik: ''Statistical topological data analysis using persistence landscapes.''
  
 
== Literature for Computer Scientists ==
 
== Literature for Computer Scientists ==
A thorough introduction to the field and approaches of computational topology. Edelsbrunner and Harer: ''Computational topology: an introduction''.<ref>H. Edelsbrunner and J. Harer, ''Computational topology: an introduction''. Providence, R.I: American Mathematical Society, 2010.
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A thorough introduction to the field and approaches of computational topology. Edelsbrunner and Harer: ''Computational topology: an introduction''.
  
<span class="Z3988" title="url_ver=Z39.88-2004&ctx_ver=Z39.88-2004&rfr_id=info%3Asid%2Fzotero.org%3A2&rft_id=urn%3Aisbn%3A978-0-8218-4925-5&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Abook&rft.genre=book&rft.btitle=Computational%20topology%3A%20an%20introduction&rft.place=Providence%2C%20R.I&rft.publisher=American%20Mathematical%20Society&rft.aufirst=Herbert&rft.aulast=Edelsbrunner&rft.au=Herbert%20Edelsbrunner&rft.au=J.%20Harer&rft.date=2010&rft.tpages=241&rft.isbn=978-0-8218-4925-5"></span>
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A general overview of persistent homology with an eye towards applications of different numerical libraries. In the supplementaries starting points for own numerical steps are given. Otter et al: ''A roadmap for the computation of persistent homology''.
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A general overview of persistent homology with an eye towards applications of different numerical libraries. In the supplementaries starting points for own numerical steps are given. Otter et al: ''A roadmap for the computation of persistent homology''.<ref>OTTER, Nina, et al. A roadmap for the computation of persistent homology. ''EPJ Data Science'', 2017, 6. Jg., Nr. 1, S. 17. [https://doi.org/10.1140/epjds/s13688-017-0109-5 doi:10.1140/epjds/s13688-017-0109-5]</ref>
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The mapper algorithm. Singh et al: ''Topological methods for the analysis of high dimensional data sets and 3d object recognition.''
  
The mapper algorithm. Singh et al: ''Topological methods for the analysis of high dimensional data sets and 3d object recognition.''<ref>SINGH, Gurjeet; MÉMOLI, Facundo; CARLSSON, Gunnar E. Topological methods for the analysis of high dimensional data sets and 3d object recognition. In: ''SPBG''. 2007. S. 91-100. [http://dx.doi.org/10.2312/SPBG/SPBG07/091-100 doi:10.2312/SPBG/SPBG07/091-100]</ref>
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== Literature for Physicists ==
 
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Starting with a topological primer, the computational setup is described and applied to immensely large structures present in our universe: the cosmic web. Pranav et al: ''The Topology of the Cosmic Web in Terms of Persistent Betti Numbers''.<ref>PRANAV, Pratyush, et al. The topology of the cosmic web in terms of persistent Betti numbers. ''Monthly Notices of the Royal Astronomical Society'', 2016, 465. Jg., Nr. 4, S. 4281-4310. [https://doi.org/10.1093/mnras/stw2862 doi:10.1093/mnras/stw2862]</ref>
== Literature for Physicists ==
 
  
 
== Literature for Biologists ==
 
== Literature for Biologists ==
  
 
== References ==
 
== References ==
<references />
 

Revision as of 21:00, 5 May 2019

This is a list of entries to the vastly growing literature in the field of topological data analysis, both from a theoretical and an applied point of view.

Literature for Mathematicians

A well-known theoretical introduction to the field. Carlsson: Topology and Data.

One of the papers introducing the notion of persistent homology of a filtration. Zomorodian and Carlsson: Computing persistent homology.

A recently introduced topological summary better suited than persistence diagrams to statistically analyze persistent homology, the persistence landscape. Bubenik: Statistical topological data analysis using persistence landscapes.

Literature for Computer Scientists

A thorough introduction to the field and approaches of computational topology. Edelsbrunner and Harer: Computational topology: an introduction.

A general overview of persistent homology with an eye towards applications of different numerical libraries. In the supplementaries starting points for own numerical steps are given. Otter et al: A roadmap for the computation of persistent homology.

The mapper algorithm. Singh et al: Topological methods for the analysis of high dimensional data sets and 3d object recognition.

Literature for Physicists

Starting with a topological primer, the computational setup is described and applied to immensely large structures present in our universe: the cosmic web. Pranav et al: The Topology of the Cosmic Web in Terms of Persistent Betti Numbers.[1]

Literature for Biologists

References

  1. PRANAV, Pratyush, et al. The topology of the cosmic web in terms of persistent Betti numbers. Monthly Notices of the Royal Astronomical Society, 2016, 465. Jg., Nr. 4, S. 4281-4310. doi:10.1093/mnras/stw2862